Sl no

Name of S/W

Linux

Windows

Features

Download

Online

Download

Online

1

nnpredict

N

Y

N

Y

Predicts Secondary Structure

2

PHD

N

Y

N

Y

Secondary Structure Prediction

3

PredictProtein

N

Y

N

Y

Secondary Structure Prediction

4

Coils

N

Y

N

Y

Predicts Coiled Coils in a Protein

5

MOTIF

N

Y

N

Y

Protein Sequence Motif prediction

6

PROSPECT

Y

N

N

N

Protein Structure Prediction and Evaluation

7

SAPS

N

Y

N

Y

Statistical Analysis of Protein Sequences

8

ROBETTA

N

Y

N

Y

Protein Structure Predition

9

SP³

N

Y

N

Y

FOLD RECOGNITION

10

Auto Dep

N

Y

N

Y

3D Structure Prediction at EMBL-EBI

11

SAPS

N

Y

N

Y

Statistics of Protein Sequences

12

ASC

Y

Y

N

Y

Surface Calculation of PDB Structures

13

PSSP

N

Y

N

Y

Protein Secondary Structure prediction

14

PSA

N

Y

N

Y

Protein Sequence Analysis